BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033F12SP1|AL429786
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1347 1786 0.0
>3x_Contig1347
Length = 6130
Score = 1786 bits (899), Expect = 0.0
Identities = 902/905 (99%)
Strand = Plus / Plus
Query: 5 ataacagcatcatataagtgggctatchttgattgctcaaaatcataatctgactcacat 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2647 ataacagcatcatataagtgggctatccttgattgctcaaaatcataatctgactcacat 2706
Query: 65 ctatcgatatcaaatgaaagaagtttggcagccaaaatcaatatctgtagtcttgcttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2707 ctatcgatatcaaatgaaagaagtttggcagccaaaatcaatatctgtagtcttgcttcc 2766
Query: 125 gtggactcatcagcaaatttaggaattaattttctcaatacatcaggaactatccttggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2767 gtggactcatcagcaaatttaggaattaattttctcaatacatcaggaactatccttggt 2826
Query: 185 tcgacatgtatgtattcaccaaagagccatatgatgccagcttttgcataagctgataaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2827 tcgacatgtatgtattcaccaaagagccatatgatgccagcttttgcataagctgataaa 2886
Query: 245 ttatctgtttctgtgatgatttgtgataatttgagcataactgataagttcttcgaggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2887 ttatctgtttctgtgatgatttgtgataatttgagcataactgataagttcttcgaggga 2946
Query: 305 ttaatttgaattaaatggcgtatcamattgacatactcactggtaacctcgctgtcggtc 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2947 ttaatttgaattaaatggcgtatcacattgacatactcactggtaacctcgctgtcggtc 3006
Query: 365 aaattatcattctccatgaaactgagtagccatttcatgatgtgagctgaaaatgcattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3007 aaattatcattctccatgaaactgagtagccatttcatgatgtgagctgaaaatgcattg 3066
Query: 425 gagttatgagcacacacaaccaaagtacttagtgctttcttgacaatagcaggatcacga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3067 gagttatgagcacacacaaccaaagtacttagtgctttcttgacaatagcaggatcacga 3126
Query: 485 tacgttgtgatatagtacttcaattcgtgtatgatatccttgacgttcttatctgtaatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3127 tacgttgtgatatagtacttcaattcgtgtatgatatccttgacgttcttatctgtaatt 3186
Query: 545 aaaagggatattatagttagtttgtatgatccaacgatagggtcatcatctgctgtcggt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3187 aaaagggatattatagttagtttgtatgatccaacgatagggtcatcatctgctgtcggt 3246
Query: 605 aggaaactcctgtataatgaagcaaatgcttctgggtcaattgatgcataataagcaatc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3247 aggaaactcctgtataatgaagcaaatgcttctgggtcaattgatgcataataagcaatc 3306
Query: 665 atctgtactataatacagcggttttcagtggaacttagctgaagtgccttgactagacag 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3307 atctgtactataatacagcggttttcagtggaacttagctgaagtgccttgactagacag 3366
Query: 725 tgtggcataccaaactctctaaatttggataacggagccaacatgaaaagtgctcttgac 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3367 tgtggcataccaaactctctaaatttggataacggagccaacatgaaaagtgctcttgac 3426
Query: 785 acgctgataatcacagatgcattagatgaaaataacaagggtttcaaagaagttaagaat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3427 acgctgataatcacagatgcattagatgaaaataacaagggtttcaaagaagttaagaat 3486
Query: 845 aggtcgaggtctggatcgataataaggtcatttgcttytagaaaccacgagtcgaccaat 904
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3487 aggtcgaggtctggatcgataataaggtcatttgcttctagaaaccacgagtcgaccaat 3546
Query: 905 tcagg 909
|||||
Sbjct: 3547 tcagg 3551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6458
Number of Sequences: 1807
Number of extensions: 6458
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)